PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009627221.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 265aa    MW: 29591.6 Da    PI: 6.7705
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009627221.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM84.81.7e-26111441128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykvePwdLp.k...kvka..eekewyfFskrdkkyatgkrknratksgyWkat 86 
                     lppG rF P+d++l+++yL  k ++++   +++ + i+e+d+y+++P +Lp +   k+     +++w+ F+ r  k       +r +  gyWk+ 
  XP_009627221.1  11 LPPGTRFYPSDKQLICYYLSSKNSADHrndFQF-NLIREIDLYNFDPFNLPdSacfKYGRgsLKRHWFCFVARVLKG-----GRRRAGGGYWKKR 99 
                     79********************88887433333.56**************953655333311233566666555543.....2445689****** PP

             NAM  87 gkdkevlsk..kgelvglkktLvfykg.rapkgektdWvmheyrl 128
                     g+ ++v+ +  ++ +vg++k++vfy g   ++++ktd +m ey+l
  XP_009627221.1 100 GRIRDVMGEgaGKVVVGTRKSFVFYLGdCIKTAVKTDLLMYEYAL 144
                     *******99777788**********983457788*********97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.29E-337160IPR003441NAC domain
PROSITE profilePS5100535.85511160IPR003441NAC domain
PfamPF023651.9E-1612144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MGDPNPMSFS LPPGTRFYPS DKQLICYYLS SKNSADHRND FQFNLIREID LYNFDPFNLP  60
DSACFKYGRG SLKRHWFCFV ARVLKGGRRR AGGGYWKKRG RIRDVMGEGA GKVVVGTRKS  120
FVFYLGDCIK TAVKTDLLMY EYALTGNPMA SFVLCRVFIK SHYRNNLSEH VFSSYGEETV  180
AAVRHVGIQC DGTAVSVTES KMHDENTVDP ENDSQALIEP VAKQIDLESG GPPVLNGFSA  240
QELTAILEGD FIELDDLLCP LSGIN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4dul_B8e-2631618166NAC domain-containing protein 19
4dul_A8e-2631618166NAC domain-containing protein 19
1ut7_B8e-2631618166NO APICAL MERISTEM PROTEIN
1ut7_A8e-2631618166NO APICAL MERISTEM PROTEIN
1ut4_B8e-2631618166NO APICAL MERISTEM PROTEIN
1ut4_A8e-2631618166NO APICAL MERISTEM PROTEIN
3swp_D1e-2511619169NAC domain-containing protein 19
3swp_C1e-2511619169NAC domain-containing protein 19
3swp_B1e-2511619169NAC domain-containing protein 19
3swp_A1e-2511619169NAC domain-containing protein 19
3swm_D1e-2511619169NAC domain-containing protein 19
3swm_C1e-2511619169NAC domain-containing protein 19
3swm_B1e-2511619169NAC domain-containing protein 19
3swm_A1e-2511619169NAC domain-containing protein 19
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18593GGRRRAGGG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009627221.10.0PREDICTED: NAC domain-containing protein 19-like isoform X2
TrEMBLK4BUV21e-139K4BUV2_SOLLC; Uncharacterized protein
STRINGSolyc04g078670.2.11e-138(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15500.15e-27NAC domain containing protein 3